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Welcome to ocsESTdb

The Oil Crops Seed ESTs database (ocsESTdb) was developed to provide users a comprehansive seed expression sequence tags database of oil crops for comparative analysis. In ocsEASTdb, it provided ESTs and unigenes detail information of four oil crop species, A.hypogaea, B.napus (high or low oil), G.max, S.indicum. For each unigene, ocsESTdb supplied nucleotide basic information, functional annotation and sequence information (full-length, ORF and peptide seq.), as well as KEGG pathway that unigene participated in and metabolism network that products of unigenes participated in. All of the data can be freely available on line very conveniently. This database provided browse, search and BLAST function module, and also supplied download, manual,  sitemap, and document for users to known database and further to understand the method of four oil crops seed ESTs collected. All of data information will update constantly.

 
News in ocsESTdb
  • (2012-12-10) ocsESTdb was on line.
  • (2012-10-20) ocsESTdb was started to develop.
  • (2012-05-31) A.hypogaea EST analysis result was published on J Plant Res.
  • (2011-12-24) S.indicum EST analysis result was published on BMC Plant Biology.
  • (2011-09-27) B.napus (high or low oil) EST analysis result was published on Plant Breeding.
  • (2011-06-12) G.max EST analysis result was published on Mol Biol Rep.
  • (2008-05-12) Bionformatics analysis of EST about A.hypogaea, B.napus (high or low oil), G.max and S.indicum.
  • (2008-04-18) Sequencing of 40 million ESTs in A.hypogaea, B.napus (high or low oil), G.max and S.indicum.
  • (2007-09-16) Construction of cDNA library for A.hypogaea, B.napus (high or low oil), G.max and S.indicum.
  • (2007-05-16) Seed RNA extraction of A.hypogaea, B.napus (high or low oil), G.max and S.indicum.
 
Collaborators
Oil Crops Research Institute, CAAS, PRC.China.
Shengyi Liu PI
Jingyin Yu Database, Data Miner
Tao Ke* Data Miner
 
Nanyang Normal University, PRC.China.
Tao Ke* Data Miner
   

Resources Links

NCBI

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Journals Links

NATURE

NATURE GENETICS

SCIENCE

Nucleic Acids Research

Bioinformatics

BMC Plant Biology

BMC Genomics

BMC bioinformatics

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