Syntenic regions between B. rapa Chromosome and A. thaliana Genome
Now, 50 synteny regions on B. rapa A08 compared to A. thalina genome are displayed below (Default:50 terms/a page):

#NumChromosomeRegionStrand Mapped ChromosomeMapped Region E_valueDetail
235 A08 538702..1333262 + Chr1 1607357..3233109 0 Link
236 A08 68476..525459 + Chr1 453288..1537525 6.10E-222 Link
237 A08 15943102..17103278 + Chr1 18030704..18812290 2.80E-136 Link
238 A08 14471993..15909254 + Chr1 16760677..17964427 2.90E-138 Link
239 A08 8043742..8415562 + Chr1 8593642..9125557 2.50E-114 Link
240 A08 1345638..1563633 + Chr1 9126737..9458026 2.50E-69 Link
241 A08 16924173..17367696 + Chr1 19035755..19492769 7.10E-54 Link
242 A08 13399177..13775959 + Chr1 11069793..11412204 3.90E-32 Link
243 A08 1578099..1771154 + Chr1 26403083..26746395 2.90E-30 Link
254 A08 2052078..3084786 - Chr1 5675704..7437342 0 Link
255 A08 7087384..8042137 - Chr1 9481532..10792575 0 Link
256 A08 3391689..3997755 - Chr1 3715184..4621580 0 Link
257 A08 3077955..3488360 - Chr1 4669784..5628656 1.10E-283 Link
258 A08 18171599..18729059 - Chr1 20553011..21028064 9.10E-196 Link
259 A08 18731055..19497372 - Chr1 19610642..20270107 8.90E-194 Link
260 A08 1805003..2490168 - Chr1 28250075..29450515 3.10E-196 Link
261 A08 1778998..2108982 - Chr1 7485636..8075037 2.20E-131 Link
262 A08 1678025..1785248 - Chr1 8125023..8349786 2.60E-59 Link
263 A08 2500923..2748772 - Chr1 27799830..28195933 3.30E-60 Link
264 A08 2817424..2988508 - Chr1 27217477..27618897 8.40E-57 Link
265 A08 3400848..3772949 - Chr1 23009911..23509053 9.30E-56 Link
266 A08 16720852..17041129 - Chr1 18926876..19094306 6.90E-37 Link
267 A08 1504533..1631531 - Chr1 8405214..8603801 3.10E-28 Link
268 A08 17596723..17813146 - Chr1 20091491..20270107 3.70E-26 Link
488 A08 5791755..6059168 + Chr2 7808871..8079360 2.70E-22 Link
494 A08 6256899..6942262 - Chr2 9051748..9814220 7.30E-146 Link
495 A08 7124540..7797452 - Chr2 14258509..14612565 4.10E-75 Link
496 A08 17402868..17513208 - Chr2 73258..158182 7.20E-45 Link
497 A08 381351..671216 - Chr2 13352917..13569623 4.00E-31 Link
498 A08 801767..906378 - Chr2 12249679..12611978 6.20E-25 Link
499 A08 4066366..4268877 - Chr2 10333284..10482795 1.50E-23 Link
754 A08 18329323..18963138 + Chr3 4289194..4787236 9.50E-58 Link
755 A08 19086326..19475636 + Chr3 4964155..5265678 2.10E-22 Link
921 A08 8419255..9414860 + Chr4 15787209..16793685 1.30E-245 Link
922 A08 6097269..6520381 + Chr4 17504564..17900305 1.90E-73 Link
923 A08 5903069..6308757 + Chr4 17097565..17403332 4.40E-48 Link
924 A08 13823345..14008331 + Chr4 15469895..15765114 9.40E-35 Link
932 A08 4002949..5073619 - Chr4 13870382..15454160 0 Link
933 A08 10180838..11348485 - Chr4 9593529..11031572 0 Link
934 A08 6516194..7084586 - Chr4 17928677..18580717 3.2e-320 Link
935 A08 9489694..9989262 - Chr4 11527229..12120134 9.60E-122 Link
936 A08 17645724..18131352 - Chr4 8730723..9186779 3.60E-105 Link
937 A08 5012526..5285132 - Chr4 13430527..13823342 3.60E-92 Link
938 A08 5605880..5812689 - Chr4 16807265..17104479 1.40E-86 Link
939 A08 5356637..5517827 - Chr4 12849709..13152277 1.60E-63 Link
940 A08 12172920..12416097 - Chr4 8347822..8572489 2.80E-49 Link
941 A08 5539738..5875406 - Chr4 12422105..12789782 1.70E-57 Link
942 A08 12454006..12989109 - Chr4 7504852..7901328 1.70E-50 Link
1219 A08 14019597..14128019 - Chr5 5718772..5833901 3.80E-72 Link
1220 A08 194760..355543 - Chr5 17390433..17816309 8.70E-26 Link

1
@2012 Department of Genomics and Molecular Biology, Oil Crops Research Institute.


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