Syntenic regions between B. rapa Chromosome and A. thaliana Genome
Now, 55 synteny regions on B. rapa A07 compared to A. thalina genome are displayed below (Default:50 terms/a page):

#NumChromosomeRegionStrand Mapped ChromosomeMapped Region E_valueDetail
188 A07 17010318..18615072 + Chr1 24248828..26221825 0 Link
189 A07 2964084..4309610 + Chr1 6872794..8352791 0 Link
190 A07 5379969..7174586 + Chr1 9481532..11278462 3.90E-264 Link
191 A07 21902566..22445588 + Chr1 29414059..29999045 1.10E-226 Link
192 A07 13756300..14083597 + Chr1 30012048..30415113 2.30E-123 Link
193 A07 20779447..21567129 + Chr1 7932854..8438745 4.60E-92 Link
194 A07 2964084..3441697 + Chr1 28382896..28751851 2.80E-53 Link
195 A07 13883866..14210136 + Chr1 5304317..5630995 1.20E-42 Link
196 A07 17745917..18584987 + Chr1 8734570..9314983 1.90E-33 Link
197 A07 15665059..16046808 + Chr1 7938251..8263587 4.30E-33 Link
198 A07 3617785..3895528 + Chr1 29070253..29463385 1.70E-32 Link
208 A07 18621761..21818708 - Chr1 26231804..29410184 0 Link
209 A07 14870655..16953995 - Chr1 25145587..28530790 0 Link
210 A07 14088891..14855933 - Chr1 28586773..29999045 0 Link
211 A07 18621761..20279958 - Chr1 6331398..7854963 0 Link
212 A07 22453427..22695233 - Chr1 30044746..30415113 1.10E-202 Link
213 A07 21964570..22629327 - Chr1 5326290..5870840 1.20E-195 Link
214 A07 14870655..15692006 - Chr1 5891324..7007651 2.50E-171 Link
215 A07 20394680..20748155 - Chr1 5891324..6209500 1.60E-92 Link
216 A07 5191413..5378218 - Chr1 8593642..8763355 1.10E-72 Link
217 A07 4621479..4909295 - Chr1 9148710..9465444 4.40E-76 Link
218 A07 4950591..5178213 - Chr1 8840402..9075279 4.20E-70 Link
219 A07 4090080..4352364 - Chr1 26485306..26928056 8.40E-66 Link
220 A07 5070441..5571613 - Chr1 25213852..25561212 6.00E-43 Link
221 A07 14716986..14819571 - Chr1 7233768..7423143 5.80E-29 Link
223 A07 21444756..21721505 - Chr1 21968071..22336908 5.50E-23 Link
461 A07 441586..935663 + Chr2 8695374..8974485 7.50E-88 Link
462 A07 2035..379216 + Chr2 8376202..8696643 3.40E-60 Link
463 A07 9958935..10210371 + Chr2 7802825..7915872 1.10E-23 Link
464 A07 5661516..6222979 + Chr2 14258509..14489602 1.50E-25 Link
465 A07 13404422..13776179 + Chr2 19151646..19647178 7.90E-24 Link
482 A07 1081313..2130939 - Chr2 11341684..12403528 0 Link
483 A07 2466889..2792103 - Chr2 9810657..10061731 7.90E-25 Link
484 A07 18270783..18528268 - Chr2 901614..1149061 3.30E-23 Link
737 A07 12927215..13604367 + Chr3 21810260..23092850 6.10E-280 Link
738 A07 11992036..12733637 + Chr3 20506992..21566482 3.90E-201 Link
739 A07 11564105..12066637 + Chr3 19723351..20481322 8.50E-153 Link
740 A07 8021432..9155986 + Chr3 8726122..9271390 1.50E-107 Link
741 A07 7151618..7892096 + Chr3 8259855..8623162 2.40E-91 Link
742 A07 12732043..13013625 + Chr3 21609307..21858204 1.50E-33 Link
743 A07 13607343..13724697 + Chr3 23150790..23316258 5.40E-33 Link
744 A07 11095320..11246808 + Chr3 19557721..19743297 2.00E-30 Link
745 A07 368892..527929 - Chr3 868791..1051522 6.30E-71 Link
746 A07 2161049..2902564 - Chr3 18474537..18944811 6.00E-81 Link
747 A07 7773895..8492320 - Chr3 8558332..8831838 3.00E-64 Link
748 A07 10622154..10816874 - Chr3 9881128..10245023 5.00E-32 Link
915 A07 7700062..8391456 - Chr4 7765073..8165008 3.00E-48 Link
916 A07 676727..922637 - Chr4 13985461..14200901 6.70E-29 Link
917 A07 93550..277240 - Chr4 14352037..14508482 8.10E-23 Link
1194 A07 2136384..2792103 + Chr5 26445086..26916294 6.80E-164 Link

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@2012 Department of Genomics and Molecular Biology, Oil Crops Research Institute.


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