Synteny regions between A.thalina Chromosome and B.rapa Genome
Now, 120 syntenic regions on A.thaliana Chr5 compared to B.rapa genome are displayed below (Default:50 terms/a page):

#NumChromosomeRegion Mapped ChromosomeMapped RegionStrandE_valueDetail
1003 Chr5 20835137..21140643 A01 11271092..12058184 + 3.70E-67 Link
1004 Chr5 22598398..22991467 A01 9850231..10282856 + 3.50E-38 Link
1005 Chr5 20745349..21357105 A01 8120067..8425748 + 9.70E-40 Link
1006 Chr5 21184522..21321236 A01 11957308..12181475 + 2.50E-27 Link
1007 Chr5 23109438..23507288 A01 664409..1285029 + 3.70E-23 Link
1008 Chr5 1105410..1507224 A01 21487475..21701154 + 7.80E-31 Link
1009 Chr5 1884928..2154553 A01 20505986..20855182 + 2.30E-25 Link
1010 Chr5 21990912..22340100 A01 9582568..9926505 + 1.70E-25 Link
1011 Chr5 26660600..26933093 A01 3387774..3762468 + 2.60E-24 Link
1012 Chr5 20303414..20676612 A01 7746598..8085858 + 7.60E-23 Link
1025 Chr5 18187630..19172823 A01 4383599..5600318 - 3.50E-216 Link
1026 Chr5 7836096..8240366 A01 10292668..10510111 - 4.10E-127 Link
1027 Chr5 5240675..5801244 A01 19285259..19655414 - 6.20E-79 Link
1028 Chr5 26648951..26957642 A01 23795178..24204189 - 9.50E-53 Link
1029 Chr5 4857259..5207987 A01 19736799..20035325 - 2.80E-47 Link
1030 Chr5 17814336..18097585 A01 5645645..5995955 - 1.90E-44 Link
1031 Chr5 23004196..23366867 A01 8435998..8686273 - 4.40E-35 Link
1032 Chr5 19207099..19337101 A01 8939769..9096423 - 3.50E-27 Link
1043 Chr5 3393569..7697927 A02 1281973..4296270 + 0 Link
1044 Chr5 20505180..22298346 A02 6549212..8276356 + 0 Link
1045 Chr5 18223453..19347629 A02 16053754..18027628 + 4.90E-230 Link
1046 Chr5 22273070..23124513 A02 5551257..6247434 + 3.10E-178 Link
1047 Chr5 8428078..9075690 A02 18483190..18895743 + 1.20E-77 Link
1048 Chr5 7696135..8423480 A02 21499411..21994521 + 9.40E-86 Link
1049 Chr5 5917..352069 A02 1132830..1367737 + 4.20E-58 Link
1050 Chr5 26425736..26728666 A02 22021979..22386161 + 1.70E-33 Link
1051 Chr5 6129237..6553242 A02 20388668..20634884 + 2.50E-26 Link
1052 Chr5 2399504..2758362 A02 21220693..21697421 + 2.50E-23 Link
1064 Chr5 395634..2943668 A02 2092..1167732 - 0 Link
1065 Chr5 23144980..23823265 A02 4904919..5536609 - 0 Link
1066 Chr5 25490073..26369751 A02 22255777..22898002 - 9.1e-322 Link
1067 Chr5 23851905..24496351 A02 4294945..4953518 - 2.00E-297 Link
1068 Chr5 19366483..20193429 A02 19481975..20220582 - 3.10E-249 Link
1069 Chr5 24821258..25273537 A02 20770029..21265537 - 4.60E-186 Link
1070 Chr5 15883179..16459237 A02 8413788..9184376 - 3.30E-114 Link
1071 Chr5 9540925..9992770 A02 19054575..19415116 - 4.40E-83 Link
1072 Chr5 25333263..25558752 A02 20631576..20816189 - 8.30E-76 Link
1073 Chr5 5460976..5895572 A02 23009515..23371264 - 4.40E-77 Link
1074 Chr5 24466531..24638599 A02 21361546..21559445 - 2.60E-62 Link
1075 Chr5 13661923..14194054 A02 23497330..23949085 - 3.90E-62 Link
1076 Chr5 9072727..9345011 A02 18901315..19053010 - 1.10E-52 Link
1077 Chr5 2858849..3160445 A02 22512956..22890631 - 1.40E-43 Link
1083 Chr5 737590..7685052 A03 27475579..31825532 + 0 Link
1084 Chr5 386018..627124 A03 27557180..27816391 + 1.50E-60 Link
1085 Chr5 20161206..20552566 A03 15808920..16003341 + 9.60E-48 Link
1086 Chr5 18801218..19307895 A03 9018376..9403880 + 1.90E-52 Link
1087 Chr5 2285040..2669923 A03 10741213..11289984 + 7.80E-45 Link
1088 Chr5 4950411..5306068 A03 18189502..18429142 + 5.90E-47 Link
1089 Chr5 7696135..7841026 A03 11123931..11297565 + 2.50E-34 Link
1111 Chr5 20757284..22883842 A03 25992577..27367835 - 0 Link

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@2012 Department of Genomics and Molecular Biology, Oil Crops Research Institute.


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