Synteny regions between A.thalina Chromosome and B.rapa Genome
Now, 91 syntenic regions on A.thaliana Chr4 compared to B.rapa genome are displayed below (Default:50 terms/a page):

#NumChromosomeRegion Mapped ChromosomeMapped RegionStrandE_valueDetail
808 Chr4 14052242..17443855 A01 3873..3540603 + 0 Link
809 Chr4 12072857..13247926 A01 6850434..8686273 + 0 Link
810 Chr4 9752824..11031572 A01 4383599..5830663 + 0 Link
811 Chr4 11126151..12120134 A01 5834344..7065447 + 0 Link
812 Chr4 17479173..17874803 A01 3507741..3939470 + 9.30E-103 Link
813 Chr4 9395636..9744860 A01 8547588..9096423 + 7.50E-83 Link
814 Chr4 8334176..8590345 A01 12943905..13491494 + 1.80E-78 Link
815 Chr4 1329952..1610037 A01 21789263..22094384 + 4.40E-77 Link
816 Chr4 9206597..9414111 A01 13500004..13883670 + 2.40E-75 Link
817 Chr4 8225481..8715339 A01 14462247..15671757 + 8.30E-59 Link
820 Chr4 13200593..14044902 A01 9109041..10335042 - 0 Link
821 Chr4 18015736..18580717 A01 3943856..4376302 - 2.30E-277 Link
822 Chr4 6713557..7454481 A01 6641818..7536422 - 4.00E-127 Link
823 Chr4 17374458..17525159 A01 3458730..3609183 - 4.90E-66 Link
824 Chr4 2289959..2760912 A01 5996334..6548538 - 1.90E-51 Link
825 Chr4 17915293..18293383 A01 2487918..2952369 - 2.70E-42 Link
833 Chr4 13177409..13571474 A02 5568508..6374357 - 5.40E-82 Link
834 Chr4 6732580..7112480 A02 15055407..15437066 - 3.50E-57 Link
835 Chr4 9648527..9867022 A02 17352543..18027628 - 5.60E-52 Link
836 Chr4 6245961..6499010 A02 15512836..16000250 - 6.80E-43 Link
837 Chr4 10319862..10704816 A02 16053754..16747185 - 1.10E-40 Link
838 Chr4 13554604..13709149 A02 7850253..8276356 - 3.60E-25 Link
839 Chr4 10157887..10321551 A02 16498458..16932540 - 6.90E-21 Link
844 Chr4 5536699..7457714 A03 16182678..16957523 + 1.90E-210 Link
845 Chr4 16213324..16913704 A03 558574..1328777 + 1.80E-168 Link
846 Chr4 16857299..17422130 A03 1065829..1873227 + 1.10E-108 Link
847 Chr4 17492115..17861261 A03 1826878..2521538 + 3.70E-68 Link
848 Chr4 345952..625850 A03 17847868..18089823 + 6.40E-49 Link
849 Chr4 13324130..13557854 A03 26001949..26472292 + 1.50E-33 Link
850 Chr4 2030319..2594119 A03 16979608..17176088 + 2.20E-35 Link
854 Chr4 11133186..16344818 A03 2531348..8246200 - 0 Link
855 Chr4 9581586..10623521 A03 8520692..9479506 - 0 Link
856 Chr4 681862..1610037 A03 17198572..17794273 - 6.4e-310 Link
857 Chr4 8672070..9495816 A03 9492931..10042932 - 3.80E-292 Link
858 Chr4 154705..333477 A03 17993058..18100139 - 9.40E-55 Link
859 Chr4 10699238..11023755 A03 8248081..8511300 - 2.80E-59 Link
860 Chr4 16402280..16799553 A03 11296345..11846764 - 2.70E-57 Link
861 Chr4 11555186..11943885 A03 16770154..17146991 - 2.30E-39 Link
862 Chr4 17388814..17525159 A03 1786696..1918667 - 3.40E-29 Link
863 Chr4 7758610..8120358 A03 23212907..23429025 - 1.00E-29 Link
864 Chr4 8208985..8513727 A03 22951283..23204355 - 1.80E-29 Link
865 Chr4 18457957..18573084 A03 2280101..2483267 - 3.10E-24 Link
866 Chr4 12878775..13060107 A03 27022886..27367835 - 1.50E-26 Link
871 Chr4 7769770..8236715 A04 3946412..4725711 + 3.20E-93 Link
874 Chr4 18071884..18584524 A04 5144625..5810745 - 1.20E-112 Link
875 Chr4 15042413..15476655 A04 6094533..6663619 - 6.90E-71 Link
876 Chr4 8588548..8869273 A04 9565295..9821431 - 1.00E-55 Link
877 Chr4 6041342..6373536 A04 16331202..17343365 - 1.10E-44 Link
893 Chr4 973924..1443499 A05 16390049..16930125 - 9.40E-141 Link
896 Chr4 9648527..10523961 A06 20918730..21740516 + 1.30E-117 Link

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@2012 Department of Genomics and Molecular Biology, Oil Crops Research Institute.


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