Synteny regions between A.thalina Chromosome and B.rapa Genome
Now, 145 syntenic regions on A.thaliana Chr3 compared to B.rapa genome are displayed below (Default:50 terms/a page):

#NumChromosomeRegion Mapped ChromosomeMapped RegionStrandE_valueDetail
561 Chr3 5097153..6242573 A01 16289994..17966189 + 3.30E-305 Link
562 Chr3 2411321..3023052 A01 21021776..21416902 + 1.20E-179 Link
563 Chr3 17962163..18869384 A01 22944269..24260721 + 5.20E-174 Link
564 Chr3 4420173..5122562 A01 19838752..20575095 + 4.80E-162 Link
565 Chr3 3475002..4041982 A01 20023902..21015313 + 1.20E-156 Link
566 Chr3 3098725..3619567 A01 21427125..21899398 + 1.30E-119 Link
567 Chr3 18855161..19192051 A01 22484027..22853991 + 6.80E-65 Link
568 Chr3 1917240..2196547 A01 24229049..24491336 + 4.50E-58 Link
569 Chr3 2217622..2391650 A01 18450614..18549635 + 5.50E-39 Link
570 Chr3 76655..197974 A01 22215852..22294035 + 1.40E-27 Link
571 Chr3 8448273..8652605 A01 12109026..12721113 + 4.60E-23 Link
576 Chr3 7777818..8450697 A01 14448766..15574206 - 3.20E-271 Link
577 Chr3 7166047..7716343 A01 15602430..16380319 - 2.10E-203 Link
578 Chr3 512312..851590 A01 19285259..19656362 - 5.10E-201 Link
579 Chr3 6251483..6696214 A01 13925558..14415096 - 1.30E-174 Link
580 Chr3 1625672..1949789 A01 24196723..24470192 - 4.80E-83 Link
581 Chr3 1053366..1362295 A01 22313064..22467035 - 4.60E-68 Link
582 Chr3 363881..513027 A01 19735506..19822481 - 1.90E-48 Link
583 Chr3 8678738..8970298 A01 12257800..12694614 - 3.70E-43 Link
584 Chr3 7963537..8209329 A01 12943905..13393828 - 1.80E-39 Link
585 Chr3 17073196..17316566 A01 10931780..11274913 - 5.20E-36 Link
586 Chr3 17517355..17832731 A01 10561293..11011155 - 2.20E-37 Link
587 Chr3 18814140..19082212 A01 3022981..3647685 - 2.80E-29 Link
596 Chr3 9565627..11468857 A02 8243116..9331785 + 1.50E-306 Link
597 Chr3 394070..1108069 A02 2396574..3155486 + 9.10E-82 Link
598 Chr3 2062206..2398291 A02 19515164..20021609 + 4.10E-28 Link
599 Chr3 16832883..17130210 A02 4568768..4802347 + 4.40E-21 Link
600 Chr3 16271652..16703366 A02 4154783..4605210 + 1.20E-22 Link
602 Chr3 634653..1075922 A02 22868834..23241357 - 2.10E-286 Link
603 Chr3 1761205..2006624 A02 20352008..20615018 - 2.20E-139 Link
604 Chr3 1266295..1799870 A02 18874932..19587254 - 3.90E-74 Link
605 Chr3 1653..258547 A02 2077417..2376442 - 2.80E-52 Link
606 Chr3 2821479..3110026 A02 832269..1187752 - 1.80E-47 Link
607 Chr3 3455355..3890826 A02 327871..586630 - 2.60E-45 Link
608 Chr3 1813267..1958299 A02 3112912..3331285 - 2.70E-26 Link
609 Chr3 18427735..18536970 A02 22173104..22323720 - 4.20E-23 Link
610 Chr3 17457795..17752416 A02 20831137..20999785 - 8.30E-26 Link
615 Chr3 4971223..7716343 A03 20951586..22730904 + 0 Link
616 Chr3 791273..2595572 A03 18492328..19564196 + 0 Link
617 Chr3 3199770..4914652 A03 19848879..20938402 + 0 Link
618 Chr3 7794957..8477392 A03 22749873..23204355 + 1.50E-82 Link
619 Chr3 326397..732875 A03 18292004..18489982 + 3.20E-93 Link
620 Chr3 406594..1108069 A03 30312931..30949984 + 1.20E-80 Link
621 Chr3 21894134..22447273 A03 14232372..14719867 + 2.70E-64 Link
622 Chr3 20358896..21125647 A03 13297105..13879318 + 5.90E-51 Link
623 Chr3 8527239..8923073 A03 23174265..23446914 + 1.90E-43 Link
624 Chr3 3034557..3414019 A03 27865784..28328197 + 1.10E-43 Link
625 Chr3 19407023..19876059 A03 25540561..26105698 + 9.40E-35 Link
626 Chr3 3455355..3770413 A03 28296742..28484631 + 6.00E-32 Link
627 Chr3 22795579..23137173 A03 14879108..15083500 + 3.60E-23 Link

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@2012 Department of Genomics and Molecular Biology, Oil Crops Research Institute.


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