Synteny regions between A.thalina Chromosome and B.rapa Genome
Now, 101 syntenic regions on A.thaliana Chr2 compared to B.rapa genome are displayed below (Default:50 terms/a page):

#NumChromosomeRegion Mapped ChromosomeMapped RegionStrandE_valueDetail
357 Chr2 7435088..8079360 A01 2872485..3426099 + 4.00E-89 Link
358 Chr2 19357478..19689173 A01 19448023..19725059 + 1.10E-51 Link
359 Chr2 10135605..10565198 A01 973242..1486246 + 1.70E-46 Link
360 Chr2 10629737..10931062 A01 1500780..1809698 + 1.20E-31 Link
361 Chr2 6986834..7326221 A01 2539048..2830646 + 1.30E-27 Link
365 Chr2 9048131..9752863 A01 3772196..4327474 - 1.20E-152 Link
366 Chr2 8090658..8559741 A01 403375..951849 - 8.10E-82 Link
367 Chr2 8647813..8880388 A01 3873..258404 - 1.70E-39 Link
368 Chr2 9874907..10132779 A01 3425008..3647685 - 8.90E-31 Link
369 Chr2 14665667..14810164 A01 5620615..5898977 - 5.20E-27 Link
379 Chr2 15718053..17551175 A03 12647709..14025029 + 0 Link
380 Chr2 17625212..19138714 A03 14067400..14941406 + 0 Link
381 Chr2 13682557..14868860 A03 24759780..25426444 + 1.40E-205 Link
382 Chr2 12781591..13640316 A03 24140394..24756470 + 9.90E-188 Link
383 Chr2 14891102..15697402 A03 25392066..25989939 + 5.60E-174 Link
384 Chr2 7409063..8079360 A03 1153117..1749962 + 4.50E-67 Link
385 Chr2 19237434..19624809 A03 14960320..15118925 + 1.70E-58 Link
386 Chr2 8005285..8559741 A03 4376050..4983290 + 1.60E-38 Link
393 Chr2 17840388..18496272 A03 325..619938 - 1.80E-299 Link
394 Chr2 6649630..7437298 A03 11304802..11964113 - 1.90E-162 Link
395 Chr2 1334512..1968037 A03 12189532..12398140 - 1.40E-87 Link
396 Chr2 10177834..10560175 A03 3813802..4392852 - 2.70E-81 Link
397 Chr2 11226615..11817867 A03 15332600..15628657 - 2.50E-80 Link
398 Chr2 12139580..12536964 A03 15162512..15275713 - 1.70E-39 Link
399 Chr2 10629737..10993652 A03 3446145..3784739 - 3.00E-36 Link
400 Chr2 6171133..6634008 A03 11807854..11964113 - 1.70E-36 Link
401 Chr2 9592996..9814220 A03 2095812..2537616 - 1.50E-27 Link
402 Chr2 9874907..10204467 A03 1653483..1985470 - 3.30E-27 Link
412 Chr2 12760139..14775035 A04 10557540..12571615 + 0 Link
413 Chr2 11329870..12084664 A04 7636312..8279584 + 2.30E-131 Link
414 Chr2 10747211..11269623 A04 7167019..7730459 + 2.70E-70 Link
418 Chr2 14750260..17863456 A04 13234537..15914909 - 0 Link
419 Chr2 9770894..10764810 A04 6080900..7285414 - 0 Link
420 Chr2 9002032..9741104 A04 4796516..5813969 - 0 Link
421 Chr2 18495341..19205112 A04 15817498..16514508 - 0 Link
422 Chr2 12085377..12499156 A04 9665064..10273713 - 2.10E-158 Link
423 Chr2 18241692..18911982 A04 533186..1103855 - 4.60E-122 Link
424 Chr2 13352917..13523708 A04 11114605..11433036 - 7.60E-46 Link
425 Chr2 16407239..16660437 A04 2395975..2931108 - 3.30E-39 Link
426 Chr2 17663444..17880563 A04 1154808..1463047 - 3.60E-27 Link
427 Chr2 16886824..17097454 A04 2074298..2259746 - 5.50E-22 Link
435 Chr2 16791098..18954619 A05 17609203..19599573 + 0 Link
436 Chr2 13672250..13888232 A05 23207889..23543714 + 6.70E-57 Link
439 Chr2 15088832..16875396 A05 19600099..21659222 - 0 Link
440 Chr2 13851062..15014284 A05 21682658..23208305 - 0 Link
441 Chr2 18939262..19689173 A05 16936093..17908710 - 0 Link
442 Chr2 12501092..13266560 A05 14742310..15705783 - 0 Link
443 Chr2 13440909..13673256 A05 23436337..23712181 - 1.60E-64 Link
444 Chr2 13350422..13451923 A05 14478894..14628439 - 5.10E-43 Link
445 Chr2 17771776..17837250 A05 18412456..18466666 - 2.50E-27 Link

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@2012 Department of Genomics and Molecular Biology, Oil Crops Research Institute.


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