Statistics of Tandem Repeat Genes among Different Species
 
Latin Name Common Name Genome Size Gene Number Tandem repeat Gene Release version
Arabidopsis lyrata Lyrate rockcress 206.7 M 32670 3609 Version 1.0 (Apr 2011)
Arabidopsis thaliana Arabidopsis 125M 35386 3503 TAIR 9.0 (Jun 2009)
Aureococcus anophagefferens heterokont algae 57M 11501 176 JGI 1.0 (Sep 2007)
Brachypodium distachyon Purple false brome 260M 31029 3233 Phytozome v6.0
Brassica oleracea cabbage 630M 45758 3443 Version 1.0
Brassica rapa Chinese cabbage 485M 41173 4501 Version 1.1
Cajanus cajan Pigeonpea 833M 48680 3837 IIPG v1.0
Carica papaya Papaya 370M 27950 1937 ASGPB v1.0
Chlamydomonas reinhardtii Green algae 130 M 17113 1220 Version 4.2
Chlorella variabilis NC64A microalgae  46M 9791 451 JGI 1.0 (Sep 2010)
Cicer arietinum chickpea 738M 28269 1396 Version 1.0
Citrullus lanatus Watermelon 425 M 23440 2248 Version 1.0
Citrus sinensis Orange 367 M 36450 3253 CITRUS v1.0 (2012)
Cucumis sativus Cucumber 350M 26682 2077 Phytozome v6.0
Fragaria vesca Strawberry 240M 34809 3823 GDR v1.0
Glycine max Soybean 1100M 75778 5764 v1.1 (Jun 2013)
Gossypium raimondii Cotton 761.4M 40976 4674 Version 2.1
Linum usitatissimum Flax 373M 43484 4169 Phytozome v9.1 v1.0
Lotus japonicus Lotus 472 M 42399 1211 Release 2.5
Malus × domestica Borkh. Apple 742M 63541 16602 GDR v1.0
Medicago truncatula Barrel medic 500M 53423 3761 Mt3.5 v3 (Jun 2011)
Musa acuminata Banana 523M 36549 1352 CIRAD v1.0
Oryza sativa L. ssp.japonica Rice 466M 67393 4544 IRGSP v1.0
Phaeodactylum tricornutum Diatom algae 27.4M 10402 440 JGI 2.0 (May 2007)
Physcomitrella pattens Moss 480M 38354 797 Version 1.6 (Jan 2008)
Populus trichocarpa Western poplar 480M 45033 5224 JGI 2.0 (Feb 2010)
Prunus mume Plum flower 280M 31390 5059 prunusmumegenome v1.0
Ricinus communis Castor bean 350M 31221 2613 Release 0.1 (May 2008)
Selaginella moellendorffii  Selaginella 212M 22285 1676 Version 1.0 (Dec 2007)
Sesamum indicum Sesame 357M 27148 2848 Version 1.0 
Setaria italica millet 490M 38801 4879 Phytozome v9.1
Solanum lycopersicum Tomato 900M 34727 4173 Version 2.3
Solanum tuberosum Potato 844M 39031 4504 Version 3.4
Sorghum bicolor Sorghum 730M 29448 4256 Sbi 1.4 (Dec 2007)
Thellugiella parvula rockface star-violet 140M 27132 2316 Thellungiella v2.0
Theobroma cacao Cacao 430-M 46143 3867 Release 0.9 (Sep 2010)
Vitis vinifera Grape vine 490M 26346 3668 Genoscope (Aug 2007)
Volvox carteri Green alga 138M 15285 1402 JGI 1.0 (Jun 2007)
Zea mays ssp. mays L. Maize 2300M 63293 2837 Release 5a (Nov 2010)
 
Distribution of Tandem Repeat Genes among Different Species
 
distribution
 
Distribution of Tandem Array Size in PTGBase
 
distribution of tandem array size
 
Statistics of Visitors
 
 
Contact
This database is currently maintained by Jingyin Yu.

The Key Laboratory of Oil Crops Biology and Genetic Breeding, the Ministry of Agriculture, Oil Crops Research Institute, the Chinese Academy of Agricultural Sciences, Wuhan 430062, China